Package: blisa
Type: Package
Title: Infer Cell-Cell Communication from Spatial Transcriptomics
Version: 1.0.0
Authors@R: c(
    person(given = "Yunshun", family = "Chen",
           role = c("aut", "cre"),
           email = "yuchen@wehi.edu.au"),
    person(given = "Lei", family = "Qin",
           role = "aut",
           email = "qin.l@wehi.edu.au"),
    person(given = "Lizhong", family = "Chen",
           role = "aut"))
Description: Identifies cell-cell communication hotspots in spatial
        transcriptomics data using bivariate Local Moran's I statistics
        on hexagonally binned cells. Provides functions for spatial
        weighting, ligand-receptor pair filtering, hotspot detection,
        and visualisation of sender-receiver cell-type interactions.
License: GPL (>= 3)
URL: https://github.com/ChenLaboratory/blisa,
        https://chenlaboratory.github.io/blisa/
BugReports: https://github.com/ChenLaboratory/blisa/issues
Encoding: UTF-8
Imports: sf, spdep, fastLISA, Matrix, SpatialExperiment,
        SummarizedExperiment, ComplexHeatmap, ggplot2, viridisLite,
        grid
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
VignetteBuilder: knitr
Suggests: knitr, rmarkdown
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libmagick++-dev gsfonts libicu-dev libpng-dev libssl-dev perl
        libproj-dev libsqlite3-dev libudunits2-dev zlib1g-dev
Repository: https://chenlaboratory.r-universe.dev
Date/Publication: 2026-07-10 00:16:30 UTC
RemoteUrl: https://github.com/chenlaboratory/blisa
RemoteRef: HEAD
RemoteSha: 2a23260da7646e1b575beb5f27bdb40d22a3fa35
NeedsCompilation: no
Packaged: 2026-07-10 11:04:13 UTC; root
Author: Yunshun Chen [aut, cre],
  Lei Qin [aut],
  Lizhong Chen [aut]
Maintainer: Yunshun Chen <yuchen@wehi.edu.au>